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hi! im trying to use my postgres db running on rds...
# ask-community
d
hi! im trying to use my postgres db running on rds as the database for orion(self hosted instance) backend. but it continuously runs into time out errors. has anyone implemented this before or facing the same issue ?
✅ 1
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Encountered exception in request:
Traceback (most recent call last):
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/errors.py", line 162, in __call__
    await <http://self.app|self.app>(scope, receive, _send)
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/exceptions.py", line 75, in __call__
    raise exc
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/exceptions.py", line 64, in __call__
    await <http://self.app|self.app>(scope, receive, sender)
  File "/usr/local/lib/python3.9/site-packages/fastapi/middleware/asyncexitstack.py", line 21, in __call__
    raise e
  File "/usr/local/lib/python3.9/site-packages/fastapi/middleware/asyncexitstack.py", line 18, in __call__
    await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 680, in __call__
    await route.handle(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 275, in handle
    await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 65, in app
    response = await func(request)
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/utilities/server.py", line 101, in handle_response_scoped_depends
    response = await default_handler(request)
  File "/usr/local/lib/python3.9/site-packages/fastapi/routing.py", line 231, in app
    raw_response = await run_endpoint_function(
  File "/usr/local/lib/python3.9/site-packages/fastapi/routing.py", line 160, in run_endpoint_function
    return await dependant.call(**values)
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/api/block_documents.py", line 62, in read_block_documents
    result = await models.block_documents.read_block_documents(
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/database/dependencies.py", line 117, in async_wrapper
    return await fn(*args, **kwargs)
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/models/block_documents.py", line 356, in read_block_documents
    result = await session.execute(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/ext/asyncio/session.py", line 215, in execute
    result = await greenlet_spawn(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/_concurrency_py3k.py", line 126, in greenlet_spawn
    result = context.throw(*sys.exc_info())
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/orm/session.py", line 1712, in execute
    result = conn._execute_20(statement, params or {}, execution_options)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1705, in _execute_20
    return meth(self, args_10style, kwargs_10style, execution_options)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/sql/elements.py", line 333, in _execute_on_connection
    return connection._execute_clauseelement(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1572, in _execute_clauseelement
    ret = self._execute_context(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1943, in _execute_context
    self._handle_dbapi_exception(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 2128, in _handle_dbapi_exception
    util.raise_(exc_info[1], with_traceback=exc_info[2])
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/compat.py", line 208, in raise_
    raise exception
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1900, in _execute_context
    self.dialect.do_execute(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/default.py", line 736, in do_execute
    cursor.execute(statement, parameters)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 479, in execute
    self._adapt_connection.await_(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/_concurrency_py3k.py", line 68, in await_only
    return current.driver.switch(awaitable)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/_concurrency_py3k.py", line 121, in greenlet_spawn
    value = await result
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 454, in _prepare_and_execute
    self._handle_exception(error)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 389, in _handle_exception
    self._adapt_connection._handle_exception(error)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 684, in _handle_exception
    raise error
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 442, in _prepare_and_execute
    self._rows = await prepared_stmt.fetch(*parameters)
  File "/usr/local/lib/python3.9/site-packages/asyncpg/prepared_stmt.py", line 176, in fetch
    data = await self.__bind_execute(args, 0, timeout)
  File "/usr/local/lib/python3.9/site-packages/asyncpg/prepared_stmt.py", line 241, in __bind_execute
    data, status, _ = await self.__do_execute(
  File "/usr/local/lib/python3.9/site-packages/asyncpg/prepared_stmt.py", line 230, in __do_execute
    return await executor(protocol)
  File "asyncpg/protocol/protocol.pyx", line 201, in bind_execute
asyncio.exceptions.TimeoutError
Copy code
INFO:     10.0.120.44:15094 - "POST /block_documents/filter HTTP/1.1" 500 Internal Server Error
ERROR:    Exception in ASGI application
Traceback (most recent call last):
  File "/usr/local/lib/python3.9/site-packages/uvicorn/protocols/http/h11_impl.py", line 404, in run_asgi
    result = await app(  # type: ignore[func-returns-value]
  File "/usr/local/lib/python3.9/site-packages/uvicorn/middleware/proxy_headers.py", line 78, in __call__
    return await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/fastapi/applications.py", line 270, in __call__
    await super().__call__(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/applications.py", line 124, in __call__
    await self.middleware_stack(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/errors.py", line 184, in __call__
    raise exc
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/errors.py", line 162, in __call__
    await <http://self.app|self.app>(scope, receive, _send)
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/cors.py", line 92, in __call__
    await self.simple_response(scope, receive, send, request_headers=headers)
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/cors.py", line 147, in simple_response
    await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/exceptions.py", line 75, in __call__
    raise exc
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/exceptions.py", line 64, in __call__
    await <http://self.app|self.app>(scope, receive, sender)
  File "/usr/local/lib/python3.9/site-packages/fastapi/middleware/asyncexitstack.py", line 21, in __call__
    raise e
  File "/usr/local/lib/python3.9/site-packages/fastapi/middleware/asyncexitstack.py", line 18, in __call__
    await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 680, in __call__
    await route.handle(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 427, in handle
    await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/fastapi/applications.py", line 270, in __call__
    await super().__call__(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/applications.py", line 124, in __call__
    await self.middleware_stack(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/errors.py", line 184, in __call__
    raise exc
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/errors.py", line 162, in __call__
    await <http://self.app|self.app>(scope, receive, _send)
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/exceptions.py", line 75, in __call__
    raise exc
  File "/usr/local/lib/python3.9/site-packages/starlette/middleware/exceptions.py", line 64, in __call__
    await <http://self.app|self.app>(scope, receive, sender)
  File "/usr/local/lib/python3.9/site-packages/fastapi/middleware/asyncexitstack.py", line 21, in __call__
    raise e
  File "/usr/local/lib/python3.9/site-packages/fastapi/middleware/asyncexitstack.py", line 18, in __call__
    await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 680, in __call__
    await route.handle(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 275, in handle
    await <http://self.app|self.app>(scope, receive, send)
  File "/usr/local/lib/python3.9/site-packages/starlette/routing.py", line 65, in app
    response = await func(request)
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/utilities/server.py", line 101, in handle_response_scoped_depends
    response = await default_handler(request)
  File "/usr/local/lib/python3.9/site-packages/fastapi/routing.py", line 231, in app
    raw_response = await run_endpoint_function(
  File "/usr/local/lib/python3.9/site-packages/fastapi/routing.py", line 160, in run_endpoint_function
    return await dependant.call(**values)
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/api/block_documents.py", line 62, in read_block_documents
    result = await models.block_documents.read_block_documents(
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/database/dependencies.py", line 117, in async_wrapper
    return await fn(*args, **kwargs)
  File "/usr/local/lib/python3.9/site-packages/prefect/orion/models/block_documents.py", line 356, in read_block_documents
    result = await session.execute(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/ext/asyncio/session.py", line 215, in execute
    result = await greenlet_spawn(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/_concurrency_py3k.py", line 126, in greenlet_spawn
    result = context.throw(*sys.exc_info())
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/orm/session.py", line 1712, in execute
    result = conn._execute_20(statement, params or {}, execution_options)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1705, in _execute_20
    return meth(self, args_10style, kwargs_10style, execution_options)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/sql/elements.py", line 333, in _execute_on_connection
    return connection._execute_clauseelement(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1572, in _execute_clauseelement
    ret = self._execute_context(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1943, in _execute_context
    self._handle_dbapi_exception(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 2128, in _handle_dbapi_exception
    util.raise_(exc_info[1], with_traceback=exc_info[2])
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/compat.py", line 208, in raise_
    raise exception
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/base.py", line 1900, in _execute_context
    self.dialect.do_execute(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/default.py", line 736, in do_execute
    cursor.execute(statement, parameters)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 479, in execute
    self._adapt_connection.await_(
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/_concurrency_py3k.py", line 68, in await_only
    return current.driver.switch(awaitable)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/util/_concurrency_py3k.py", line 121, in greenlet_spawn
    value = await result
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 454, in _prepare_and_execute
    self._handle_exception(error)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 389, in _handle_exception
    self._adapt_connection._handle_exception(error)
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 684, in _handle_exception
    raise error
  File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/asyncpg.py", line 442, in _prepare_and_execute
    self._rows = await prepared_stmt.fetch(*parameters)
  File "/usr/local/lib/python3.9/site-packages/asyncpg/prepared_stmt.py", line 176, in fetch
    data = await self.__bind_execute(args, 0, timeout)
  File "/usr/local/lib/python3.9/site-packages/asyncpg/prepared_stmt.py", line 241, in __bind_execute
    data, status, _ = await self.__do_execute(
  File "/usr/local/lib/python3.9/site-packages/asyncpg/prepared_stmt.py", line 230, in __do_execute
    return await executor(protocol)
  File "asyncpg/protocol/protocol.pyx", line 201, in bind_execute
asyncio.exceptions.TimeoutError
m
Generally Speaking there are a number of factors that could be contributing to the timeouts. You can increase the db timeout via the profile configuration or by setting an environment variable. Specifically this setting 
PREFECT_ORION_DATABASE_TIMEOUT='5.0'
you can view available configuration with this command for prefect 2. 
prefect config view --show-defaults
d
thanks @Mason Menges increasing the timeout limits for api request and db timeout helped.
🙌 1
a
Hey @Deepanshu Aggarwal what values of timeout worked for you? Struggling with this for a while
d
somewhere around 2 minutes
a
thanks, something else must be wrong. My pods are going into CrashLoopBackOff with asyncio.exceptions.TimeoutError error
d
are you self hosting orion as well or using prefect cloud ?
a
self hosting
d
try increasing the db timeouts
a
yes, just tried that and increased the prefect database connection timeouts further
it's working fine right now, thanks
👍 1
and pod just got killed again with the same error facepalm
do you know which timeout should be increased for db timeouts?
d
Copy code
PREFECT_ORION_DATABASE_TIMEOUT: 600
PREFECT_ORION_DATABASE_CONNECTION_TIMEOUT: 600
a
both are set to 600 but pod has restarted twice in 5 mins
btw, it's an external postgres db
both of these are actually set to 3600
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