I am running an agent through supervisorin a remote server/ I am specifying the path for prefect to run.

command=/home/ubuntu/project/env/bin/prefect agent start --work-queue "my queue"

This works fine but then when i run flows in the UI the worker is using the global python runtime and no the one in the virtual environment, please help

Sorry to hear that Tomas. Is this for Prefect 1 or 2? What environment is your agent running in?