Noam
08/11/2024, 8:45 PMMarvin
08/11/2024, 8:45 PMrun_namespaced_job
function from the prefect_kubernetes
module. Here's a concise overview of what you'll need:
1. Set Up Kubernetes Jobs: Define your Kubernetes jobs using KubernetesJob
and provide the necessary credentials.
2. Run Namespaced Jobs: Utilize run_namespaced_job
to execute these jobs within your flow or subflow.
### Example
python
from prefect_kubernetes import KubernetesJob, run_namespaced_job
from prefect_kubernetes.credentials import KubernetesCredentials
# Example function to run a Kubernetes job
def run_k8s_job():
k8s_creds = KubernetesCredentials.load("k8s-creds")
k8s_job = KubernetesJob.from_yaml_file(
credentials=k8s_creds,
manifest_path="path/to/job.yaml",
)
return run_namespaced_job(kubernetes_job=k8s_job)
# Example subflow
@flow
def subflow():
result = run_k8s_job()
return result
# Example main flow
@flow
def main_flow():
subflow_execution = subflow()
return subflow_execution
if __name__ == "__main__":
main_flow()
### Resources
- Prefect Documentation on Kubernetes Flows:
Prefect Kubernetes Flows Integration
- GitHub Issues Discussing Subflows:
- Flows with subflows incorrectly reporting state as Failed
- Subflows cause parent to be incorrectly marked as failed
- Long running kubernetes jobs are marked as crashed
Reviewing these links will provide more context on integrating and troubleshooting subflows with Kubernetes jobs in Prefect.Noam
08/11/2024, 8:52 PMMarvin
08/11/2024, 8:52 PMrun_namespaced_job
function to create and execute Kubernetes jobs.
3. Subflows Creating Jobs: These Kubernetes jobs can, in turn, run subflows, and each subflow can create additional Kubernetes jobs.
Important Points:
- Ensure that the Kubernetes job manifests and credentials are correctly set up.
- Given Prefect’s ability to handle subflows, the infrastructure should be appropriately managed and monitored to avoid potential issues like incorrectly marked states or job evictions.
### Example Workflow
Here’s a more detailed example to demonstrate the interactions:
main_flow.py
python
from prefect import flow
from prefect_kubernetes import KubernetesJob, run_namespaced_job
from prefect_kubernetes.credentials import KubernetesCredentials
# Function to run a Kubernetes job
def run_k8s_job(job_manifest_path):
k8s_creds = KubernetesCredentials.load("k8s-creds")
k8s_job = KubernetesJob.from_yaml_file(
credentials=k8s_creds,
manifest_path=job_manifest_path,
)
return run_namespaced_job(kubernetes_job=k8s_job)
# Subflow that creates a Kubernetes job
@flow
def subflow(job_manifest_path):
result = run_k8s_job(job_manifest_path)
return result
# Main flow that triggers the subflow
@flow
def main_flow():
job_manifest_path = "path/to/job.yaml"
subflow_execution = subflow(job_manifest_path)
return subflow_execution
if __name__ == "__main__":
main_flow()
### Execution Flow
1. Kubernetes Worker: The worker pulls main_flow
from your work pool and executes it.
2. Main Flow Execution:
- Calls subflow
and provides the job manifest path.
3. Subflow Execution:
- Calls run_namespaced_job
, creating and running another Kubernetes job based on the provided manifest.
This way, you can chain Kubernetes jobs using subflows orchestrated by Prefect.
### Resources Links
- Prefect Documentation on Kubernetes Flows:
Prefect Kubernetes Flows
- GitHub Issues on Subflows:
- Flows with subflows incorrectly reporting state as Failed
- Subflows cause parent to be incorrectly marked as failed
- Long running kubernetes jobs are marked as crashed
These references should provide more context and specific configurations.Noam
08/11/2024, 8:55 PMMarvin
08/11/2024, 8:56 PMpython
import yaml
from prefect import flow, task
from prefect_kubernetes import KubernetesJob, run_namespaced_job
from prefect_kubernetes.credentials import KubernetesCredentials
# Task to modify the Kubernetes job manifest
@task
def modify_manifest(manifest_path, params):
with open(manifest_path, 'r') as file:
manifest = yaml.safe_load(file)
# Modify the manifest with new params
for key, value in params.items():
# Assuming params is a dictionary and manifest structure is known
manifest['spec']['template']['spec']['containers'][0]['command'] = value
return manifest
# Task to run a Kubernetes job
@task
def run_k8s_job(modified_manifest):
k8s_creds = KubernetesCredentials.load("k8s-creds")
k8s_job = KubernetesJob(manifest=modified_manifest, credentials=k8s_creds)
return run_namespaced_job(kubernetes_job=k8s_job)
# Subflow that modifies and runs a Kubernetes job
@flow
def subflow(manifest_path, params):
modified_manifest = modify_manifest(manifest_path, params)
result = run_k8s_job(modified_manifest)
return result
# Main flow that triggers subflows
@flow
def main_flow():
job_manifest_path = "path/to/job.yaml"
params_list = [
{'command': ["python", "script1.py"]},
{'command': ["python", "script2.py"]},
]
for params in params_list:
subflow(job_manifest_path, params)
if __name__ == "__main__":
main_flow()
### Explanation
1. modify_manifest Task: This task loads the Kubernetes job manifest, modifies it by injecting the provided parameters, and returns the modified manifest.
2. run_k8s_job Task: This task accepts the modified manifest and runs a namespaced Kubernetes job using Prefect.
3. subflow Function: Calls the modify_manifest
and run_k8s_job
tasks to execute the job with modified parameters.
4. main_flow Function: Iterates over a list of parameters, calling the subflow
for each set of parameters.
### Resources
- Prefect Kubernetes Flows Integration: Prefect Kubernetes Flows
This should cover dynamically modifying and reusing a Kubernetes job manifest for running subflows with different parameters.