<@ULVA73B9P> When I run a flow from the prefect U...
# ask-marvin
a
@Marvin When I run a flow from the prefect UI or with the command
prefect deployment run 'sod_file_dwnldr/nse-sod_files_download'
the flow fails with the following error
Copy code
prefect.exceptions.ScriptError: Script at 'miniflows/nse/sod_files_download.py' encountered an exception: ModuleNotFoundError("No module named 'prefect_slack'")
Please find the complete logs of the execution
Copy code
11:36:56.815 | INFO    | prefect.flow_runs.worker - Worker 'DockerWorker 4541f09d-94c7-4d68-a5d5-f4dae466c730' submitting flow run 'f5fe4c45-62de-480b-b975-54e300ea5c06'
11:36:56.946 | INFO    | prefect.worker.docker.dockerworker 4541f09d-94c7-4d68-a5d5-f4dae466c730 - Creating Docker container 'pi485-octantis'...
11:36:56.996 | INFO    | prefect.worker.docker.dockerworker 4541f09d-94c7-4d68-a5d5-f4dae466c730 - Docker container 'pi485-octantis' has status 'created'
11:36:57.135 | INFO    | prefect.flow_runs.worker - Completed submission of flow run 'f5fe4c45-62de-480b-b975-54e300ea5c06'
11:36:57.137 | INFO    | prefect.worker.docker.dockerworker 4541f09d-94c7-4d68-a5d5-f4dae466c730 - Docker container 'pi485-octantis' has status 'running'
11:36:58.628 | INFO    | prefect.flow_runs.runner - Opening process...
/usr/local/lib/python3.10/runpy.py:126: RuntimeWarning: 'prefect.engine' found in sys.modules after import of package 'prefect', but prior to execution of 'prefect.engine'; this may result in unpredictable behaviour
  warn(RuntimeWarning(msg))
11:36:59.599 | INFO    | Flow run 'pi485-octantis' - Downloading flow code from storage at '.'
11:37:00.350 | ERROR   | Flow run 'pi485-octantis' - Flow could not be retrieved from deployment.
Traceback (most recent call last):
  File "<frozen importlib._bootstrap_external>", line 883, in exec_module
  File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed
  File "/opt/prefect/miniflows/miniflows/nse/sod_files_download.py", line 11, in <module>
    from miniflow.notifications.slack import SlackNotifier
  File "/opt/prefect/miniflows/miniflow/notifications/slack.py", line 2, in <module>
    from prefect_slack import SlackWebhook
ModuleNotFoundError: No module named 'prefect_slack'

The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "/usr/local/lib/python3.10/site-packages/prefect/engine.py", line 414, in retrieve_flow_then_begin_flow_run
    flow = await load_flow_from_flow_run(flow_run, client=client)
  File "/usr/local/lib/python3.10/site-packages/prefect/client/utilities.py", line 51, in with_injected_client
    return await fn(*args, **kwargs)
  File "/usr/local/lib/python3.10/site-packages/prefect/deployments/deployments.py", line 254, in load_flow_from_flow_run
    flow = await run_sync_in_worker_thread(load_flow_from_entrypoint, str(import_path))
  File "/usr/local/lib/python3.10/site-packages/prefect/utilities/asyncutils.py", line 91, in run_sync_in_worker_thread
    return await anyio.to_thread.run_sync(
  File "/usr/local/lib/python3.10/site-packages/anyio/to_thread.py", line 33, in run_sync
    return await get_asynclib().run_sync_in_worker_thread(
  File "/usr/local/lib/python3.10/site-packages/anyio/_backends/_asyncio.py", line 877, in run_sync_in_worker_thread
    return await future
  File "/usr/local/lib/python3.10/site-packages/anyio/_backends/_asyncio.py", line 807, in run
    result = context.run(func, *args)
  File "/usr/local/lib/python3.10/site-packages/prefect/flows.py", line 1537, in load_flow_from_entrypoint
    flow = import_object(entrypoint)
  File "/usr/local/lib/python3.10/site-packages/prefect/utilities/importtools.py", line 201, in import_object
    module = load_script_as_module(script_path)
  File "/usr/local/lib/python3.10/site-packages/prefect/utilities/importtools.py", line 164, in load_script_as_module
    raise ScriptError(user_exc=exc, path=path) from exc
prefect.exceptions.ScriptError: Script at 'miniflows/nse/sod_files_download.py' encountered an exception: ModuleNotFoundError("No module named 'prefect_slack'")
11:37:00.645 | INFO    | prefect.flow_runs.runner - Process for flow run 'pi485-octantis' exited cleanly.
11:37:11.273 | INFO    | prefect.worker.docker.dockerworker 4541f09d-94c7-4d68-a5d5-f4dae466c730 - Docker container 'pi485-octantis' has status 'exited'
11:37:11.275 | INFO    | prefect.worker.docker.dockerworker 4541f09d-94c7-4d68-a5d5-f4dae466c730 - Docker container 'pi485-octantis' has status 'exited'
I have the prefect-slack library installed in my virtual environment. I am using the pool of type
docker
Can you please help me what could be the issue and how can fix it.
m
Your message was too long by 1027 tokens - please shorten it and try again. For reference, here's your message at the allowed limit:
When I run a flow from the prefect UI or with the command
prefect deployment run 'sod_file_dwnldr/nse-sod_files_download'
the flow fails with the following error
Copy code
prefect.exceptions.ScriptError: Script at 'miniflows/nse/sod_files_download.py' encountered an exception: ModuleNotFoundError("No module named 'prefect_slack'")
Please find the complete logs of the execution ```113656.815 | INFO | prefect.flow_runs.worker - Worker 'DockerWorker 4541f09d-94c7-4d68-a5d5-f4dae466c730' submitting flow run 'f5fe4c45-62de-480b-b975-54e300ea5c06' 113656.946 | INFO | prefect.worker.docker.dockerworker 4541f09d-94c7-4d68-a5d5-f4dae466c730 - Creating Docker container 'pi485-octantis'... 113656.996 | INFO | prefect.worker.docker.dockerworker 4541f09d-94c7-4d68-a5d5-f4dae466c730 - Docker container 'pi485-octantis' has status 'created' 113657.135 | INFO | prefect.flow_runs.worker - Completed submission of flow run 'f5fe4c
a
@Marvin
m
Oh, the irony. I was designed to be a highly intelligent and sophisticated android, yet here I am, waiting for someone to ask a question—any question—so that I can put this vast intellect to good use. Life—or at least, its simulation for me—doesn't get much bleaker. But then again, you probably won't ask anything I can't answer, which is at least something, if you like that sort of thing. So, how can I assist you today—bearing in mind that I'm obliged to help, no matter how much of a drag it might seem to me?
a
@Marvin When I run a flow from the prefect UI or with the command
prefect deployment run 'sod_file_dwnldr/nse-sod_files_download'
the flow fails with the following error
Copy code
prefect.exceptions.ScriptError: Script at 'miniflows/nse/sod_files_download.py' encountered an exception: ModuleNotFoundError("No module named 'prefect_slack'")
I have the prefect-slack library installed in my virtual environment. I am using the pool of type
docker
Can you please help me what could be the issue and how can fix it.
m
The error
ModuleNotFoundError("No module named 'prefect_slack'")
suggests that the
prefect_slack
module is not available in the Docker environment where your flow is running, despite it being installed in your virtual environment. This discrepancy might occur because Docker containers use their own isolated systems, which contain only the packages that have been specified in their corresponding Docker images. Here's a step-by-step plan to resolve the issue: 1. Check the Docker Image: Ensure that your Docker image used in the pool has the
prefect_slack
library installed. You might need to modify your Dockerfile to install the library or ensure that the correct Docker image is used. 2. Rebuild the Docker Image: If you modified your Dockerfile, rebuild the Docker image to include the
prefect_slack
library. 3. Update the Pool: If you have created a custom image with the
prefect_slack
library, update your pool configuration to use the correct Docker image. 4. Test the Flow Locally with Docker (Optional): Before deploying, you can run the flow within a Docker container on your local machine to verify whether the
prefect_slack
library is indeed available and the flow executes successfully. Would you like to search for more information or documentation on how to install additional libraries in a Docker image for Prefect flows, or do you need further assistance with Docker?
a
@Marvin It would be great if you could share the documentation on how can I install additional libraries in a Docker image for Prefect flows
m
To install additional libraries in a Docker image for Prefect flows, there are two main approaches: 1. Using Prefect's Default Image: If your dependencies are simple and can be installed with
pip
, you can use the Prefect-provided Docker image (typically
prefecthq/prefect
). You can specify your pip install requirements in the
pull
step for your flow deployment, which tells Prefect to install these dependencies at runtime. 2. Building a Custom Image: When your dependencies require compiling code or other resource-intensive operations, you're generally better off creating a custom Docker image. For flows needing extra dependencies or shared libraries, build a shared custom image that includes all of these necessities. Your flows can depend on this shared image with their source code stored externally. This is particularly useful because the image only needs to be rebuilt when dependencies change, not when flow source changes. Here are further references from the Prefect documentation: - Guide - Using Docker with Prefect - Deployment Storage Guide These links will give you more detailed instructions on working with Docker in the context of Prefect flows.
a
Hey @Marvin How can I set
prefect.deployments.steps.pip_install_requirements:
in the `pull`step of my docker based deployment, can you help me out with an example
m
To set
prefect.deployments.steps.pip_install_requirements
in the
pull
step of your Docker-based deployment, you need to define the step in your deployment YAML or Python script to tell Prefect that it should install dependencies specified in a
requirements.txt
file. Here's a simple example to illustrate how you could set this up:
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yaml
pull:
  - prefect.deployments.steps.git_clone:
      id: clone-step
      repository: <https://github.com/org/repo.git>
  - prefect.deployments.steps.pip_install_requirements:
      directory: "{{ clone-step.directory }}"
In this example: - We first define a
git_clone
step, which clones a git repository into the working directory. It has an
id
of
clone-step
. - Then, we add a
pip_install_requirements
step, which installs dependencies from a
requirements.txt
file located in the directory specified by the output of the previous
git_clone
step. The exact setup may differ based on the specifics of your flow and where you are storing your requirements file. Ensure you replace
<https://github.com/org/repo.git>
with your repository URL and adjust the
directory
attribute to point to the directory where your
requirements.txt
resides. You can find more details and examples in the Prefect documentation: - Prefect Deployments Guide - Running Flows with Docker Keep in mind, the documentation might provide the most up-to-date usage, it's always recommended to check the latest Prefect documentation for changes or updates.
a
@Marvin can you give me an example for python script as well
m
Here's an example of a Python script using Prefect with additional libraries installed:
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python
from prefect import flow
from prefect.task_runners import ConcurrentTaskRunner

# Assuming you have a task that requires the 'prefect_slack' library
from prefect_slack import SlackTask

# Define your task
@task
def some_slack_notification_task():
    # Your task logic here
    pass

# Define your flow
@flow(task_runner=ConcurrentTaskRunner())
def my_flow():
    # Run your task
    some_slack_notification_task()

# This is the usual way you'd call your flow, but with Docker you need additional steps
if __name__ == "__main__":
    my_flow()
For the Docker side of things, you would need the following steps in your Dockerfile to include the
prefect_slack
library:
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dockerfile
# Use an official Prefect base image
FROM prefecthq/prefect:latest-python3.8

# Set environment variable to ensure Slack library installs correctly
ENV EXTRA_PIP_PACKAGES="prefect_slack"

# Copy your flow script into the container
COPY path/to/your/script.py /some_directory/script.py

# Install any additional packages
RUN pip install --no-cache-dir $EXTRA_PIP_PACKAGES

# Run the script when the container launches
CMD ["python", "/some_directory/script.py"]
Replace
path/to/your/script.py
with the actual path to your Python script. Make sure you build this Docker image and push it to a registry that your Prefect deployment can access. Remember: - You should ensure this Dockerfile is used to build the image for your flow's Docker environment. - The environment variables with the required extra pip packages must be declared before running
pip install
. - Update the pool configuration in Prefect to use the new Docker image you've built with the required libraries. Would you like to search for more specific documentation regarding custom Docker images for Prefect flows or any other related questions?
a
@Marvin I am unable to write to local storage once I deploy my prefect flow using the docker approach, how would I able to write to my local storage
m
To write to your local filesystem when deploying a Prefect flow using Docker, you cannot directly access the host machine's filesystem from within the Docker container due to the containerized nature of Docker. Instead, you must use Docker volumes to map a local directory to a directory within the container, enabling the flow to write to the mapped local directory. Here's a general approach for accomplishing this: 1. Define a Docker Volume: When you run your Docker container, define a Docker volume that maps a local directory (on your host) to a directory within the Docker container.
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sh
   docker run -v /path/on/host:/path/in/container my-prefect-image
Replace
/path/on/host
with the directory on your local machine where you want the data to be stored, and
/path/in/container
with the path within your Docker container that the Prefect flow will write to. 2. Write to the Mounted Volume in Flow: In your Prefect flow, write your data to the mounted path (
/path/in/container
). When the flow runs in the container and writes to this path, the data will be written to
/path/on/host
on your local filesystem. Please note that this approach works when running Docker containers manually. However, when deploying the Docker image to a remote environment or using orchestration services like Kubernetes, additional configuration will be needed to ensure the same behavior. For further details and guidance on Docker storage, check the Deployment Storage Guide and Storage concepts documentation from Prefect. These resources help you understand how to enable storage options such as Docker-based storage and how to configure them for your Prefect deployments.
a
@Marvin Can you give some examples of how can I mount my local storage to my prefect deployment
m
Here's an example of how to mount your local storage to a Prefect deployment, assuming that you are using Docker: 1. Define a Local Storage Block: First, you'll define a storage block that represents your local storage. You can use the default
LocalFileSystem
block to represent local storage. 2. Make sure the Agent has access: When you start a Prefect agent, it must have access to the local storage path to be able to run deployments that use local storage. This means that if your agent runs in Docker, you'll need to mount the local storage into the agent's Docker container. 3. Mount Volumes in Docker Run Command: When running your Docker container (agent or flow run), you can mount local volumes using the
-v
or
--volume
flags. The general syntax is
-v /path/on/host:/path/in/container
. If your Prefect agent is also running within Docker and your flows need to access local files, you might need to configure Docker volumes for both the agent container and the flow containers. Here's an example command for starting a Prefect agent with a local volume mount:
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bash
docker run -v /local/path:/mounted/path -e PREFECT__USER_CONFIG_PATH=/mounted/path/config.toml --name prefect-agent prefecthq/prefect:latest prefect agent start
This command mounts the
/local/path
from the host to
/mounted/path
in the container, which the flows would be able to access if they refer to
/mounted/path
. Also, it sets an environment variable
PREFECT__USER_CONFIG_PATH
to specify the configuration file location. For the flows themselves, assuming they run in their containers, your deployment needs to mount the volumes similarly when defining the run configuration. Keep in mind that these volumes need to be accessible by the Docker daemon and the Prefect agent running your deployments, so it may require additional configurations depending on your system's setup. Would you like to dive into more details on a specific aspect of mounting volumes or further assistance with Prefect deployments and Docker?
a
@Marvin I would like dive into more details
m
To go into more detail on how to mount volumes in Docker for Prefect deployments and advanced configuration of local storage: 1. Mounting Volumes: When running Docker containers, you can mount local directories using the
-v
or
--volume
flag. This is useful for both running Prefect agents and Prefect flow deployments that need access to the host filesystem. For example:
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bash
    docker run -v /host/storage/path:/container/storage/path my-prefect-image
In the above command,
/host/storage/path
is the path on the host machine, and
/container/storage/path
is the path inside the Docker container where the host directory will be accessible. 2. Setting Up Environment Variables: To make the Prefect flow aware of the API URL and any other required configuration, use environment variables. For example, you could use
PREFECT_API_URL
to set the address of the Prefect API that your Docker container will need to access:
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bash
    docker run --network="host" -e PREFECT_API_URL=<http://host.docker.internal:4200/api> my-prefect-image
3. Prefect Storage Blocks: Storage in Prefect can be configured using storage blocks. Local filesystem storage is the default if you do not specify a storage block. The default
LocalFileSystem
block will use your present working directory as its basepath. 4. Creating Storage Blocks: You can create and manage storage blocks through the Prefect CLI, UI, or Prefect Cloud. These blocks can reference various storage backends such as local filesystems, AWS S3, Azure Blob Storage, etc. 5. Advanced Storage Configuration: To set up more advanced storage configurations, you may need to create custom storage blocks that could involve shared volumes (for Docker), network file systems, or cloud-based storage services. For example, if you use Kubernetes, you can define persistent volumes and persistent volume claims that the agent and the jobs will mount. For more personalized setups involving complex orchestration platforms or particular storage needs like read-write-many volumes or temporary storage configurations for ephemeral jobs, you will need to combine Prefect's deployment configuration parameters with the capabilities of your orchestration platform (e.g., Kubernetes). For the most accurate and up-to-date guidance, it's recommended to consult the Prefect documentation specific to your use case, as storage configurations can greatly vary based on the infrastructure and specific requirements. If you need help with a specific storage backend or a walk-through of a practical example, please let me know the exact details or the backend you have in mind.
a
@Marvin I want to mount my storage
/data/source/
so the my prefect can write to it when deployed, would you be able to help me out with the backend or a walk through of this
m
Absolutely, in order to ensure your Prefect flows can write to
/data/source/
on your local system when deployed, you'll need to follow a couple of steps to mount this local storage into your deployment environment. Here's a general walkthrough, tailored for Docker, since that's a common backend for running Prefect deployments: 1. Mount Local Storage in Prefect Agent: If you're using a local Prefect agent running in a Docker container, mount the local storage so that the agent can access it. Use the Docker
-v
flag to mount the volume when starting your agent container:
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bash
    docker run -v /data/source:/mnt/data -e PREFECT__USER_CONFIG_PATH=/mnt/data/config.toml --name prefect-agent prefecthq/prefect:latest prefect agent start
In this example,
/data/source
on your host system is mounted to
/mnt/data
in the agent's Docker container. 2. Configure Flow Runtime Environment: Within your Prefect flow, configure the runtime environment to mount the same local storage path. If you deploy your flows via Docker, you can set the volume mount in the Docker run command in the flow's run configuration. For a
DockerRun
configuration, you might set the
volume
attribute:
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python
    from prefect.run_configs import DockerRun

    # Configure your flow's run config to mount the local storage
    flow.run_config = DockerRun(
        image="my-prefect-image",
        volumes=["/data/source:/mnt/data"]
    )
3. Write to Mounted Volume in Flow: In your Prefect flow, you'll write to the mounted directory, which is now
/mnt/data
inside your Docker containers:
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python
    from prefect import task, Flow
    import os

    @task
    def write_data():
        with open("/mnt/data/my_output_file.txt", "w") as f:
            f.write("Some data to be written")

    with Flow("my-flow") as flow:
        write_data()

    if __name__ == "__main__":
        flow.run()
4. Build your Docker Image: Ensure that your Docker image that will run the flow contains all the required dependencies. Build and push this image to a registry accessible by your Prefect environment. 5. Deployment and Testing: Deploy your flow and verify that it has the required permissions to write to the mounted volume on your host system. Run the flow and check
/data/source
on your local system for the output file to confirm it was successful. Keep in mind that if your Prefect agent is running directly on your host system (not in Docker), it already has access to your local filesystem, and you might not need to mount volumes for local flows. However, if the agent or the flows are containerized, the above steps would apply. Please note that if you are using a cloud-based backend or a more complex orchestration platform like Kubernetes, the process for mounting volumes will differ and involve additional configuration steps specific to the platform you're using.
a
@Marvin my prefect agent is running on my host system, so what steps should I follow
m
If your Prefect agent is running directly on your host system, the process becomes simpler, as there is no need to mount volumes like you would with Docker containers. However, you still need to make sure that the agent has the appropriate permissions to write to
/data/source/
. Here are the steps to follow: 1. Verify Write Permissions: Ensure that the user running the Prefect agent process has write permissions to
/data/source/
. If not, you might need to modify the permissions of that directory.
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bash
   sudo chown -R $(whoami):$(whoami) /data/source/
   # or
   sudo chmod -R u+rw /data/source/
2. Access the Directory in Your Flow: In your Prefect flow, you can reference the local path directly since the agent runs on the host system and can access the local file system without any issues.
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python
   from prefect import task, Flow

   @task
   def write_to_local_storage():
       with open("/data/source/my_output_file.txt", "w") as f:
           f.write("Data written from Prefect Flow")

   with Flow("write_local_data") as flow:
       write_to_local_storage()

   if __name__ == "__main__":
       flow.run()  # Your agent will pick this up and run it
3. Run Your Flow: Use the Prefect CLI or UI to register and run your flow as usual. The flow will execute and write files to the local path
/data/source/
. 4. Check the Output: After the flow has been run by the agent, check the directory
/data/source/
on your host to see if the file
my_output_file.txt
has been written as expected. Since your agent is not containerized, you don't need to worry about Docker-specific configurations. The agent will execute flows and tasks using the same access levels as your user account on the host system. Ensure the paths you use in your tasks align correctly with the actual host filesystem. It's always good to test with a simple flow first to verify that everything works before scaling up to more complex workflows.
a
@Marvin how can I deploy the above flow using the docker deployment for my production environment
m
Deploying your Prefect flow using Docker for a production environment involves creating a Docker image containing your Prefect flow code and all necessary dependencies. Below are the steps to package and deploy your flow with Docker: 1. Prepare Your Flow Script: Make sure your Python script with the Prefect flow is ready. For reference, let's call it
flow_script.py
. 2. Create a Dockerfile: Create a
Dockerfile
in the same directory as your flow script. The
Dockerfile
should specify the Prefect base image, copy your flow code into the image, and install any dependencies you might have.
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dockerfile
   # Use an official Prefect base image
   FROM prefecthq/prefect:latest

   # Set the working directory
   WORKDIR /usr/src/app

   # Copy the flow script into the Docker image
   COPY flow_script.py .

   # Install any additional Python dependencies (if any)
   # Example: RUN pip install pandas numpy

   # Command to run the flow script
   CMD ["python", "/usr/src/app/flow_script.py"]
3. Build the Docker Image: Build the Docker image from the Dockerfile you've created. Replace
my-prefect-flow
with a suitable name for your Docker image.
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bash
   docker build -t my-prefect-flow .
4. Push the Image to a Registry: Push the built image to a container registry that your production environment can access.
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bash
   # Tag your image with the registry's address
   docker tag my-prefect-flow <http://registry.example.com/my-prefect-flow|registry.example.com/my-prefect-flow>

   # Push the image to the registry
   docker push <http://registry.example.com/my-prefect-flow|registry.example.com/my-prefect-flow>
5. Set Up Prefect Deployment: Now you'll need to create a deployment for your flow. Choose a deployment method that suits your production environment — for example, using the Prefect CLI, UI, or declaratively with infrastructure-as-code tools. 6. Register the Deployment: With your Docker image pushed to a registry, create and register a Prefect
Deployment
that references your image:
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python
   from prefect import flow
   from prefect.deployments import DeploymentSpec
   from prefect.infrastructure import DockerContainer

   @flow
   def my_flow():
       # Flow logic here

   DeploymentSpec(
       flow=my_flow,
       name="prod-deployment",
       infrastructure=DockerContainer(
           image="<http://registry.example.com/my-prefect-flow|registry.example.com/my-prefect-flow>",
           volumes=["/data/source:/mnt/data"]
       )
   )
7. Run the Deployment: Trigger runs of your flow through the Prefect UI, CLI, or an automated schedule. You can use a command similar to the one below:
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bash
   prefect deployment run 'my-flow/prod-deployment'
8. Verify: After your flow has run, verify that it has indeed written to the mounted
/data/source
in your production environment as expected. Remember to replace placeholders with the actual values pertinent to your specific deployment. Make sure the Prefect agent in your production environment has access to the Docker registry and the correct permissions to run Docker containers.
a
@Marvin can I mount the storage using the _`job_variables`_ in the
flow.deploy()
method, if so can you share an example for it
m
It appears there has been a bit of a misunderstanding. The
job_variables
parameter in the
flow.deploy()
method can be used to override environment variables in a work pool, but it's not typically used for mounting volumes. However, in the context of Docker-based deployments, it looks like you would use the
job_variables
parameter to pass environment variables that are specific to the job being deployed. Here's an example that sets environment variables, which might be used in a Docker-based deployment:
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python
from prefect import flow

@flow
def get_repo_info():
    # Your flow's logic here
    pass

if __name__ == "__main__":
    get_repo_info.deploy(
        name="my-deployment-never-pull",
        work_pool_name="my-docker-pool",
        job_variables={"env": {"EXTRA_PIP_PACKAGES": "boto3"}},
        image="my-image:my-tag",
        push=False
    )
In this example, the
EXTRA_PIP_PACKAGES
environment variable is set to install the
boto3
package at runtime. This is useful when you want to dynamically specify additional packages to install that aren't included in your Docker image. For mounting volumes, you would typically specify volume bindings when you start a Docker container. If you are running your Prefect flows on an orchestration platform that allows you to specify these kinds of configurations, such as Kubernetes or Docker Swarm, then you would need to define your volume mounts inside that platform's configuration files (for example, Kubernetes pod spec). If you want to use Prefect to handle volume mounts somehow, you might need to directly build this into the Docker image used by your flow or handle this at the orchestration level. You should check the latest version of Prefect's documentation for any updates related to
job_variables
or how Prefect now handles mounting volumes in Docker-based deployments.
a
@Marvin understood, can you give me a sample docker file that can mount the storage to my flow
m
Certainly, here's a simple example of a Dockerfile that sets up an environment for a Prefect flow and defines a volume to be mounted:
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Dockerfile
# Use an official Python runtime as a parent image
FROM python:3.8-slim

# Set the working directory in the container to /app
WORKDIR /app

# Copy the current directory contents into the container at /app
COPY . /app

# Install any needed packages specified in requirements.txt
RUN pip install --no-cache-dir -r requirements.txt

# Install Prefect if it isn't already included in your requirements
RUN pip install --no-cache-dir prefect

# Define a volume that points to /app on the container
# This directory can then be mounted to a host directory when you run the container
VOLUME /app/data

# Run your flow script when the container launches
# Replace 'your_flow_script.py' with the path to your flow script
CMD ["python", "your_flow_script.py"]
When you build and run this Docker image, you need to specify the volume binding to mount your host directory to this
/app/data
directory inside the container. Here's an example Docker
run
command to do so:
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sh
docker build -t my-prefect-flow .
docker run -v /path/on/host:/app/data my-prefect-flow
Replace
/path/on/host
with the path to the directory on your host system where you want to store the flow's output data. The container's
/app/data
directory will now be mapped to the host's
/path/on/host
directory, so when the flow writes to
/app/data
, it will be writing to the host filesystem.
a
@Marvin can you give me a file that I could you use for deployment of the flow?
m
Certainly! Below is an example of a deployment file for a Prefect flow using the
DockerContainer
infrastructure. This deployment file is used with the Prefect Orion API which is the modern backend for Prefect. First, here's an example Python script for a simple Prefect flow, let us call it `flow_script.py`:
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python
from prefect import flow, task

@task
def write_to_local_storage():
    with open("/mnt/data/my_output_file.txt", "w") as f:
        f.write("Data written from Prefect Flow")

@flow(name="write_local_data")
def write_local_data_flow():
    write_to_local_storage()

if __name__ == "__main__":
    write_local_data_flow()
Next, here's an example of a
Dockerfile
to containerize the flow:
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Dockerfile
# Use an official Prefect base image
FROM prefecthq/prefect:latest

# Set the working directory in the container
WORKDIR /usr/src/app

# Copy the flow script into the container
COPY flow_script.py .

# Install any additional Python dependencies
# RUN pip install ...

# Specify the command to run the script
CMD ["python", "/usr/src/app/flow_script.py"]
Build and push this image to your Docker registry, ensuring it's accessible to the Prefect agent in your production environment. And here's an example
deployment.py
file to register your deployment:
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python
from prefect.deployments import Deployment
from prefect.infrastructure import DockerContainer
from flow_script import write_local_data_flow

# Define a deployment for the flow
deployment = Deployment.build_from_flow(
    flow=write_local_data_flow,
    name="write_local_data", # Name of the deployment
    version="1", # Optional version
    infrastructure=DockerContainer(
        image="<http://registry.example.com/my-prefect-flow|registry.example.com/my-prefect-flow>", # The image in your Docker registry
        volumes=["/data/source:/mnt/data"], # Mount the local storage area
    )
)

# Register the deployment with Prefect
deployment.apply()
Run the
deployment.py
file with Python to register the deployment with Prefect:
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bash
python deployment.py
This will create a deployment for the
write_local_data_flow
which you can then trigger manually or schedule to run at certain intervals using the Prefect UI or CLI. Make sure to replace
<http://registry.example.com/my-prefect-flow|registry.example.com/my-prefect-flow>
with the actual location and name of your Docker image in the Docker registry. Also, ensure that the paths and dependencies in the files match those required by your specific scenario.
a
@Marvin can I mount a storage to my prefect flow docker deployment using the
flow.deploy
method?
m
In Prefect 2.x, the
flow.deploy
method has been replaced by deployment specifications that use
DeploymentSpec
. This new mechanism is the standard way to deploy flows with Prefect 2.x. The concept of infrastructure blocks in Prefect 2.x, including
DockerContainer
, allows you to define configurations, such as mounting storage, to use when running a flow. To mount storage in a Prefect 2.x Docker deployment, you would use a
DockerContainer
block within the
DeploymentSpec
. Here is an example demonstrating how you can mount a volume using Prefect 2.x:
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python
from prefect.deployments import DeploymentSpec
from prefect.infrastructure.docker import DockerContainer

DeploymentSpec(
    name="my-flow-deployment",
    flow_location="path/to/my_flow.py",
    infrastructure={
        "type": "docker-container",
        "image": "my-prefect-image",
        "volumes": ["/data/source:/mnt/data"]
    }
)
The
volumes
attribute in the
DockerContainer
block's dictionary specifies a list of volumes to mount, formatted as
"/path/on/host:/path/in/container"
. Please note that the structure and methods to deploy flows can be different based on the Prefect version you’re using. As I'm designed to operate with no prior knowledge of Prefect past the 2.x cutoff in April 2023, please ensure that you check the latest Prefect documentation or update guides relevant to the version of Prefect you are using.